val img : Bistro.container_image listval trinity :
?mem:int ->
?threads:int ->
?no_normalize_reads:bool ->
?run_as_paired:bool ->
?min_kmer_cov:int ->
?ss_lib_type:[ `R | `F | `RF | `FR ] ->
Fastq_sample.t list ->
Formats.fasta Bistro.fileval prepare_fastq :
int ->
Formats.fastq Bistro.file ->
Formats.fastq Bistro.fileval uniq_count_stats : Formats.sam Bistro.file -> Bistro.text Bistro.fileval insilico_read_normalization :
?mem:int ->
?pairs_together:bool ->
?parallel_stats:bool ->
max_cov:int ->
Formats.fastq Bistro.file SE_or_PE.t ->
Formats.fastq Bistro.file SE_or_PE.tval get_Trinity_gene_to_trans_map :
Formats.fasta Bistro.file ->
Bistro.text Bistro.file