package bistro-bio

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package bistro-bio
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Module
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{http://cab.spbu.ru/files/release3.14.0/manual.htmlSPADES assembler

}

val spades : ?single_cell:bool -> ?iontorrent:bool -> ?threads:int -> ?memory:int -> Fastq_sample.t list -> [ `spades ] Bistro.directory
val contigs : [ `spades ] Bistro.directory -> Formats.fasta Bistro.file
val scaffolds : [ `spades ] Bistro.directory -> Formats.fasta Bistro.file
val rnaspades : ?threads:int -> ?memory:int -> ?ss:[ `fr | `rf ] -> Fastq_sample.t list -> [ `rnaspades ] Bistro.directory
val transcripts : [ `rnaspades ] Bistro.directory -> Formats.fasta Bistro.file
val hard_filtered_transcripts : [ `rnaspades ] Bistro.directory -> Formats.fasta Bistro.file
val soft_filtered_transcripts : [ `rnaspades ] Bistro.directory -> Formats.fasta Bistro.file