package phylogenetics

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Legacy code: provides a functor to build from SEQUENCE modules.

Parameters

module S : Seq.S

Signature

type t
type base = S.base
type sequence = S.t
val of_string_list : string list -> t
val of_assoc_list : (Sigs.index * sequence) list -> t
val of_fasta : string -> t
val pp : Stdlib.Format.formatter -> t -> unit
val get_base : t -> seq:Sigs.index -> pos:int -> base
val length : t -> int
val nb_seq : t -> int
val to_file : t -> string -> unit
val equal : t -> t -> bool
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