package phylogenetics

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Module type for alignments of sequences (eg, DNA alignment.)

type t
type base
type sequence
val of_string_list : string list -> t
val of_assoc_list : (index * sequence) list -> t
val of_fasta : string -> t
val pp : Format.formatter -> t -> unit
val get_base : t -> seq:index -> pos:int -> base
val length : t -> int
val nb_seq : t -> int
val to_file : t -> string -> unit
val equal : t -> t -> bool