bio_io 0.4.0 · OCaml Package

val names : string list

val bitscore : 
  ([< `Read | `Set_and_create ], t, Base.float) Fieldslib.Field.t_with_perm

val evalue : 
  ([< `Read | `Set_and_create ], t, Base.float) Fieldslib.Field.t_with_perm

val send : 
  ([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm

val sstart : 
  ([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm

val qend : 
  ([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm

val qstart : 
  ([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm

val gapopen : 
  ([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm

val mismatch : 
  ([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm

val length : 
  ([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm

val pident : 
  ([< `Read | `Set_and_create ], t, Base.float) Fieldslib.Field.t_with_perm

val saccver : 
  ([< `Read | `Set_and_create ], t, Base.string) Fieldslib.Field.t_with_perm

val qaccver : 
  ([< `Read | `Set_and_create ], t, Base.string) Fieldslib.Field.t_with_perm

val make_creator : 
  qaccver:
    (([< `Read | `Set_and_create ], t, Base.string) Fieldslib.Field.t_with_perm ->
      'a ->
      ('b -> Base.string) * 'c) ->
  saccver:
    (([< `Read | `Set_and_create ], t, Base.string) Fieldslib.Field.t_with_perm ->
      'c ->
      ('b -> Base.string) * 'd) ->
  pident:
    (([< `Read | `Set_and_create ], t, Base.float) Fieldslib.Field.t_with_perm ->
      'd ->
      ('b -> Base.float) * 'e) ->
  length:
    (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm ->
      'e ->
      ('b -> Base.int) * 'f) ->
  mismatch:
    (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm ->
      'f ->
      ('b -> Base.int) * 'g) ->
  gapopen:
    (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm ->
      'g ->
      ('b -> Base.int) * 'h) ->
  qstart:
    (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm ->
      'h ->
      ('b -> Base.int) * 'i) ->
  qend:
    (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm ->
      'i ->
      ('b -> Base.int) * 'j) ->
  sstart:
    (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm ->
      'j ->
      ('b -> Base.int) * 'k) ->
  send:
    (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm ->
      'k ->
      ('b -> Base.int) * 'l) ->
  evalue:
    (([< `Read | `Set_and_create ], t, Base.float) Fieldslib.Field.t_with_perm ->
      'l ->
      ('b -> Base.float) * 'm) ->
  bitscore:
    (([< `Read | `Set_and_create ], t, Base.float) Fieldslib.Field.t_with_perm ->
      'm ->
      ('b -> Base.float) * 'n) ->
  'a ->
  ('b -> t) * 'n

val create : 
  qaccver:Base.string ->
  saccver:Base.string ->
  pident:Base.float ->
  length:Base.int ->
  mismatch:Base.int ->
  gapopen:Base.int ->
  qstart:Base.int ->
  qend:Base.int ->
  sstart:Base.int ->
  send:Base.int ->
  evalue:Base.float ->
  bitscore:Base.float ->
  t

val map : 
  qaccver:
    (([< `Read | `Set_and_create ], t, Base.string) Fieldslib.Field.t_with_perm ->
      Base.string) ->
  saccver:
    (([< `Read | `Set_and_create ], t, Base.string) Fieldslib.Field.t_with_perm ->
      Base.string) ->
  pident:
    (([< `Read | `Set_and_create ], t, Base.float) Fieldslib.Field.t_with_perm ->
      Base.float) ->
  length:
    (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm ->
      Base.int) ->
  mismatch:
    (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm ->
      Base.int) ->
  gapopen:
    (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm ->
      Base.int) ->
  qstart:
    (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm ->
      Base.int) ->
  qend:
    (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm ->
      Base.int) ->
  sstart:
    (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm ->
      Base.int) ->
  send:
    (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm ->
      Base.int) ->
  evalue:
    (([< `Read | `Set_and_create ], t, Base.float) Fieldslib.Field.t_with_perm ->
      Base.float) ->
  bitscore:
    (([< `Read | `Set_and_create ], t, Base.float) Fieldslib.Field.t_with_perm ->
      Base.float) ->
  t

val iter : 
  qaccver:
    (([< `Read | `Set_and_create ], t, Base.string) Fieldslib.Field.t_with_perm ->
      Base.unit) ->
  saccver:
    (([< `Read | `Set_and_create ], t, Base.string) Fieldslib.Field.t_with_perm ->
      Base.unit) ->
  pident:
    (([< `Read | `Set_and_create ], t, Base.float) Fieldslib.Field.t_with_perm ->
      Base.unit) ->
  length:
    (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm ->
      Base.unit) ->
  mismatch:
    (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm ->
      Base.unit) ->
  gapopen:
    (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm ->
      Base.unit) ->
  qstart:
    (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm ->
      Base.unit) ->
  qend:
    (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm ->
      Base.unit) ->
  sstart:
    (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm ->
      Base.unit) ->
  send:
    (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm ->
      Base.unit) ->
  evalue:
    (([< `Read | `Set_and_create ], t, Base.float) Fieldslib.Field.t_with_perm ->
      Base.unit) ->
  bitscore:
    (([< `Read | `Set_and_create ], t, Base.float) Fieldslib.Field.t_with_perm ->
      Base.unit) ->
  Base.unit

val fold : 
  init:'a ->
  qaccver:
    ('a ->
      ([< `Read | `Set_and_create ], t, Base.string)
        Fieldslib.Field.t_with_perm ->
      'b) ->
  saccver:
    ('b ->
      ([< `Read | `Set_and_create ], t, Base.string)
        Fieldslib.Field.t_with_perm ->
      'c) ->
  pident:
    ('c ->
      ([< `Read | `Set_and_create ], t, Base.float) Fieldslib.Field.t_with_perm ->
      'd) ->
  length:
    ('d ->
      ([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm ->
      'e) ->
  mismatch:
    ('e ->
      ([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm ->
      'f) ->
  gapopen:
    ('f ->
      ([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm ->
      'g) ->
  qstart:
    ('g ->
      ([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm ->
      'h) ->
  qend:
    ('h ->
      ([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm ->
      'i) ->
  sstart:
    ('i ->
      ([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm ->
      'j) ->
  send:
    ('j ->
      ([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm ->
      'k) ->
  evalue:
    ('k ->
      ([< `Read | `Set_and_create ], t, Base.float) Fieldslib.Field.t_with_perm ->
      'l) ->
  bitscore:
    ('l ->
      ([< `Read | `Set_and_create ], t, Base.float) Fieldslib.Field.t_with_perm ->
      'm) ->
  'm

val map_poly : 
  ([< `Read | `Set_and_create ], t, 'a) Fieldslib.Field.user ->
  'a list

val for_all : 
  qaccver:
    (([< `Read | `Set_and_create ], t, Base.string) Fieldslib.Field.t_with_perm ->
      Base.bool) ->
  saccver:
    (([< `Read | `Set_and_create ], t, Base.string) Fieldslib.Field.t_with_perm ->
      Base.bool) ->
  pident:
    (([< `Read | `Set_and_create ], t, Base.float) Fieldslib.Field.t_with_perm ->
      Base.bool) ->
  length:
    (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm ->
      Base.bool) ->
  mismatch:
    (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm ->
      Base.bool) ->
  gapopen:
    (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm ->
      Base.bool) ->
  qstart:
    (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm ->
      Base.bool) ->
  qend:
    (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm ->
      Base.bool) ->
  sstart:
    (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm ->
      Base.bool) ->
  send:
    (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm ->
      Base.bool) ->
  evalue:
    (([< `Read | `Set_and_create ], t, Base.float) Fieldslib.Field.t_with_perm ->
      Base.bool) ->
  bitscore:
    (([< `Read | `Set_and_create ], t, Base.float) Fieldslib.Field.t_with_perm ->
      Base.bool) ->
  Base.bool

val exists : 
  qaccver:
    (([< `Read | `Set_and_create ], t, Base.string) Fieldslib.Field.t_with_perm ->
      Base.bool) ->
  saccver:
    (([< `Read | `Set_and_create ], t, Base.string) Fieldslib.Field.t_with_perm ->
      Base.bool) ->
  pident:
    (([< `Read | `Set_and_create ], t, Base.float) Fieldslib.Field.t_with_perm ->
      Base.bool) ->
  length:
    (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm ->
      Base.bool) ->
  mismatch:
    (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm ->
      Base.bool) ->
  gapopen:
    (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm ->
      Base.bool) ->
  qstart:
    (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm ->
      Base.bool) ->
  qend:
    (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm ->
      Base.bool) ->
  sstart:
    (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm ->
      Base.bool) ->
  send:
    (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm ->
      Base.bool) ->
  evalue:
    (([< `Read | `Set_and_create ], t, Base.float) Fieldslib.Field.t_with_perm ->
      Base.bool) ->
  bitscore:
    (([< `Read | `Set_and_create ], t, Base.float) Fieldslib.Field.t_with_perm ->
      Base.bool) ->
  Base.bool

val to_list : 
  qaccver:
    (([< `Read | `Set_and_create ], t, Base.string) Fieldslib.Field.t_with_perm ->
      'a) ->
  saccver:
    (([< `Read | `Set_and_create ], t, Base.string) Fieldslib.Field.t_with_perm ->
      'a) ->
  pident:
    (([< `Read | `Set_and_create ], t, Base.float) Fieldslib.Field.t_with_perm ->
      'a) ->
  length:
    (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm ->
      'a) ->
  mismatch:
    (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm ->
      'a) ->
  gapopen:
    (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm ->
      'a) ->
  qstart:
    (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm ->
      'a) ->
  qend:
    (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm ->
      'a) ->
  sstart:
    (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm ->
      'a) ->
  send:
    (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm ->
      'a) ->
  evalue:
    (([< `Read | `Set_and_create ], t, Base.float) Fieldslib.Field.t_with_perm ->
      'a) ->
  bitscore:
    (([< `Read | `Set_and_create ], t, Base.float) Fieldslib.Field.t_with_perm ->
      'a) ->
  'a list

module Direct : sig ... end

package bio_io