package bio_io

  1. Overview
  2. Docs

Module Mmseqs.RecordSource

Sourcetype t = {
  1. query : Base.string;
  2. target : Base.string;
  3. fident : Base.float;
  4. alnlen : Base.int;
  5. mismatch : Base.int;
  6. gapopen : Base.int;
  7. qstart : Base.int;
  8. qend : Base.int;
  9. tstart : Base.int;
  10. tend : Base.int;
  11. evalue : Base.float;
  12. bits : Base.float;
}

As of this commit ae7398d65f0c273d3d2c71fcf9bbd96dac695904, mmseqs2 switches to fident as the default rather than pident.

Sourceval bits : t -> Base.float
Sourceval evalue : t -> Base.float
Sourceval tend : t -> Base.int
Sourceval tstart : t -> Base.int
Sourceval qend : t -> Base.int
Sourceval qstart : t -> Base.int
Sourceval gapopen : t -> Base.int
Sourceval mismatch : t -> Base.int
Sourceval alnlen : t -> Base.int
Sourceval fident : t -> Base.float
Sourceval target : t -> Base.string
Sourceval query : t -> Base.string
Sourcemodule Fields : sig ... end
Sourceval t_of_sexp : Ppx_sexp_conv_lib.Sexp.t -> t
Sourceval sexp_of_t : t -> Ppx_sexp_conv_lib.Sexp.t
Sourceval of_string : Base.String.t -> t
Sourceval to_string : t -> Base.String.t