package bistro

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in-package search v0.2.0

package bistro

bistro
- Bistro
  - Private
  - Shell_dsl
  - Template_dsl
  - Workflow
  - binary_file
  - bz2
  - csv
  - directory_t
  - gz
  - html
  - pdf
  - png
  - regular_file_t
  - sexp_value
  - svg
  - tar
  - text
  - tsv
  - zip
bistro.engine
- Bistro_engine
  - Allocator
  - Db
  - Docker
  - Eval_thread
    
    Infix
  - Execution_env
  - Execution_trace
    
    Outcome
    
    Run_details
  - Local_backend
  - Logger
    
    t
  - Lwt_queue
  - Misc
  - Path
  - Scheduler
    
    Backend
    
    Gc
    
    Make
    
    Backend
  - Shell_command
  - Singularity
bistro.internals
- Bistro_internals
  - Command
  - Template
  - Workflow
    
    Any
    
    Map
    
    Set
    
    T
    
    Table
    
    Docker_image
    
    Singularity_image
bistro.multinode
- Bistro_multinode
  - Client
  - Server
bistro.nlp
- Bistro_nlp
  - Stanford_parser
    
    deps
bistro.script
- Bistro_script
bistro.unix
- Bistro_unix
  - Cmd
bistro.utils
- Bistro_utils
  - Console_logger
  - Dot_output
  - Html_logger
  - R_script
  - Repo
  - Report
    
    Md
  - Toplevel_eval
    
    Make
    
    P

Legend:
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Module
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Parameter
Class
Class type

val digest : 'a -> string

val quote : string -> string

val exec_exn : string Core.Array.t -> unit Lwt.t

val mv : string -> string -> unit Lwt.t

val remove_if_exists : string -> unit Lwt.t

val redirection : string -> [> `FD_move of Unix.file_descr ] Lwt.t

val touch : string -> unit Lwt.t

val docker_chown : path:string -> uid:int -> unit Lwt.t

val absolutize : Core_kernel__.Import.string -> Core_kernel__.Import.string

val relativize : from:string -> string -> string

val ln : 
  Core_kernel__.Import.string ->
  Core_kernel__.Import.string ->
  unit Lwt.t

val cp : 
  Core_kernel__.Import.string ->
  Core_kernel__.Import.string ->
  unit Lwt.t

val files_in_dir : string -> Core.String.t list Lwt.t

val glob : 
  type_selection:[< `Directory | `File ] option ->
  pattern:string option ->
  string ->
  (string list, [> Rresult.R.msg ]) Rresult.result

val du : string -> (Core.Int.t, [> Rresult.R.msg ]) Rresult.result

val rm_rf : string -> (unit, [> Rresult.R.msg ]) Bos.OS.result

val waitpid : int -> (int * Lwt_unix.process_status) Lwt.t

val load_value : Base.string -> 'a

val save_value : data:'a -> Base.string -> unit