package bistro

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in-package search v0.2.0

package bistro

bistro
- Bistro
  - Private
  - Shell_dsl
  - Template_dsl
  - Workflow
  - binary_file
  - bz2
  - csv
  - directory_t
  - gz
  - html
  - pdf
  - png
  - regular_file_t
  - sexp_value
  - svg
  - tar
  - text
  - tsv
  - zip
bistro.engine
- Bistro_engine
  - Allocator
  - Db
  - Docker
  - Eval_thread
    
    Infix
  - Execution_env
  - Execution_trace
    
    Outcome
    
    Run_details
  - Local_backend
  - Logger
    
    t
  - Lwt_queue
  - Misc
  - Path
  - Scheduler
    
    Backend
    
    Gc
    
    Make
    
    Backend
  - Shell_command
  - Singularity
bistro.internals
- Bistro_internals
  - Command
  - Template
  - Workflow
    
    Any
    
    Map
    
    Set
    
    T
    
    Table
    
    Docker_image
    
    Singularity_image
bistro.multinode
- Bistro_multinode
  - Client
  - Server
bistro.nlp
- Bistro_nlp
  - Stanford_parser
    
    deps
bistro.script
- Bistro_script
bistro.unix
- Bistro_unix
  - Cmd
bistro.utils
- Bistro_utils
  - Console_logger
  - Dot_output
  - Html_logger
  - R_script
  - Repo
  - Report
    
    Md
  - Toplevel_eval
    
    Make
    
    P

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Module
Module type
Parameter
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Class type

type t = {

logger : Logger.t;
db : Db.t;
allocator : Allocator.t;

}

type token = unit

val create : 
  ?np:int ->
  ?mem:[ `GB of int ] ->
  ?loggers:
    < event : Db.t -> Logger.time -> Logger.event -> unit
      ; stop : unit Lwt.t.. >
      list ->
  Db.t ->
  t

val log : ?time:Logger.time -> t -> Logger.event -> unit

val run_shell_command : 
  'a ->
  unit ->
  Shell_command.t ->
  (int * bool, string) Core.Result.t Lwt.t

val eval : 'a -> unit -> ('b -> 'c) -> 'b -> (unit, string) Core.result Lwt.t

val build_trace : 
  t ->
  'a Bistro_internals.Workflow.t ->
  Allocator.request ->
  (unit ->
    Allocator.resource ->
    (Execution_trace.Run_details.t, Bistro_engine.Execution_trace.Set.t)
      Lwt_result.t) ->
  (Execution_trace.t, Bistro_engine.Execution_trace.Set.t) Stdlib.result Lwt.t

val stop : 'a -> unit Lwt.t