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Opam plugin "depext" may require upgrading/reinstalling. Reinstall the plugin on the current switch? [Y/n] y The following actions will be performed: - recompile opam-depext 1.2.3 <><> Processing actions <><><><><><><><><><><><><><><><><><><><><><><><><><><><> -> retrieved opam-depext.1.2.3 (cached) -> removed opam-depext.1.2.3 -> installed opam-depext.1.2.3 Done. <><> opam-depext.1.2.3 installed successfully <><><><><><><><><><><><><><><><><> => opam-depext is unnecessary when used with opam >= 2.1. Please use opam install directly instead # Run eval $(opam env) to update the current shell environment <><> Carrying on to "opam depext -viy mpi.1.03 ocamlfind.1.9.6 host-arch-x86_64.1 conf-pkg-config.3 conf-mpi.1" Since version 2.1, opam now handles external dependencies alongside OCaml ones, and the `depext` plugin interface is provided for backwards compatibility only. Consider using your usual `opam install` command to install both OCaml and system dependencies, or `opam install <pkg> --depext-only` if you want to only install external dependencies. # Detecting depexts using vars: arch=x86_64, os=linux, os-distribution=debian, os-family=debian # The following system packages are needed: mpi-default-dev pkg-config [NOTE] Package host-arch-x86_64 is already installed (current version is 1). [NOTE] Package ocamlfind is already installed (current version is 1.9.6). The following actions will be performed: - install conf-pkg-config 3 - install conf-mpi 1 - install mpi 1.03 ===== 3 to install ===== The following system packages will first need to be installed: mpi-default-dev pkg-config <><> Handling external dependencies <><><><><><><><><><><><><><><><><><><><><><> Let opam run your package manager to install the required system packages? (answer 'n' for other options) [Y/n] y + /usr/bin/sudo "apt-get" "install" "-qq" "-yy" "mpi-default-dev" "pkg-config" - debconf: delaying package configuration, since apt-utils is not installed - Selecting previously unselected package libmagic-mgc. - (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 18764 files and directories currently installed.) - Preparing to unpack .../00-libmagic-mgc_1%3a5.44-3_amd64.deb ... - Unpacking libmagic-mgc (1:5.44-3) ... - Selecting previously unselected package libmagic1:amd64. - Preparing to unpack .../01-libmagic1_1%3a5.44-3_amd64.deb ... - Unpacking libmagic1:amd64 (1:5.44-3) ... - Selecting previously unselected package file. - Preparing to unpack .../02-file_1%3a5.44-3_amd64.deb ... - Unpacking file (1:5.44-3) ... - Selecting previously unselected package m4. - Preparing to unpack .../03-m4_1.4.19-3_amd64.deb ... - Unpacking m4 (1.4.19-3) ... - Selecting previously unselected package autoconf. - Preparing to unpack .../04-autoconf_2.71-3_all.deb ... - Unpacking autoconf (2.71-3) ... - Selecting previously unselected package autotools-dev. - Preparing to unpack .../05-autotools-dev_20220109.1_all.deb ... - Unpacking autotools-dev (20220109.1) ... - Selecting previously unselected package automake. - Preparing to unpack .../06-automake_1%3a1.16.5-1.3_all.deb ... - Unpacking automake (1:1.16.5-1.3) ... - Selecting previously unselected package libgfortran5:amd64. - Preparing to unpack .../07-libgfortran5_12.2.0-14_amd64.deb ... - Unpacking libgfortran5:amd64 (12.2.0-14) ... - Selecting previously unselected package libgfortran-12-dev:amd64. - Preparing to unpack .../08-libgfortran-12-dev_12.2.0-14_amd64.deb ... - Unpacking libgfortran-12-dev:amd64 (12.2.0-14) ... - Selecting previously unselected package gfortran-12. - Preparing to unpack .../09-gfortran-12_12.2.0-14_amd64.deb ... - Unpacking gfortran-12 (12.2.0-14) ... - Selecting previously unselected package gfortran. - Preparing to unpack .../10-gfortran_4%3a12.2.0-3_amd64.deb ... - Unpacking gfortran (4:12.2.0-3) ... - Selecting previously unselected package libnl-3-200:amd64. - Preparing to unpack .../11-libnl-3-200_3.7.0-0.2+b1_amd64.deb ... - Unpacking libnl-3-200:amd64 (3.7.0-0.2+b1) ... - Selecting previously unselected package libnl-route-3-200:amd64. - Preparing to unpack .../12-libnl-route-3-200_3.7.0-0.2+b1_amd64.deb ... - Unpacking libnl-route-3-200:amd64 (3.7.0-0.2+b1) ... - Selecting previously unselected package libibverbs1:amd64. - Preparing to unpack .../13-libibverbs1_44.0-2_amd64.deb ... - Unpacking libibverbs1:amd64 (44.0-2) ... - Selecting previously unselected package ibverbs-providers:amd64. - Preparing to unpack .../14-ibverbs-providers_44.0-2_amd64.deb ... - Unpacking ibverbs-providers:amd64 (44.0-2) ... - Selecting previously unselected package javascript-common. - Preparing to unpack .../15-javascript-common_11+nmu1_all.deb ... - Unpacking javascript-common (11+nmu1) ... - Selecting previously unselected package libevent-core-2.1-7:amd64. - Preparing to unpack .../16-libevent-core-2.1-7_2.1.12-stable-8_amd64.deb ... - Unpacking libevent-core-2.1-7:amd64 (2.1.12-stable-8) ... - Selecting previously unselected package libevent-pthreads-2.1-7:amd64. - Preparing to unpack .../17-libevent-pthreads-2.1-7_2.1.12-stable-8_amd64.deb ... - Unpacking libevent-pthreads-2.1-7:amd64 (2.1.12-stable-8) ... - Selecting previously unselected package libpsm-infinipath1. - Preparing to unpack .../18-libpsm-infinipath1_3.3+20.604758e7-6.2_amd64.deb ... - Unpacking libpsm-infinipath1 (3.3+20.604758e7-6.2) ... - Selecting previously unselected package libpsm2-2. - Preparing to unpack .../19-libpsm2-2_11.2.185-2_amd64.deb ... - Unpacking libpsm2-2 (11.2.185-2) ... - Selecting previously unselected package librdmacm1:amd64. - Preparing to unpack .../20-librdmacm1_44.0-2_amd64.deb ... - Unpacking librdmacm1:amd64 (44.0-2) ... - Selecting previously unselected package libfabric1:amd64. - Preparing to unpack .../21-libfabric1_1.17.0-3_amd64.deb ... - Unpacking libfabric1:amd64 (1.17.0-3) ... - Selecting previously unselected package libhwloc15:amd64. - Preparing to unpack .../22-libhwloc15_2.9.0-1_amd64.deb ... - Unpacking libhwloc15:amd64 (2.9.0-1) ... - Selecting previously unselected package libmunge2. - Preparing to unpack .../23-libmunge2_0.5.15-2_amd64.deb ... - Unpacking libmunge2 (0.5.15-2) ... - Selecting previously unselected package libpciaccess0:amd64. - Preparing to unpack .../24-libpciaccess0_0.17-2_amd64.deb ... - Unpacking libpciaccess0:amd64 (0.17-2) ... - Selecting previously unselected package libicu72:amd64. - Preparing to unpack .../25-libicu72_72.1-3_amd64.deb ... - Unpacking libicu72:amd64 (72.1-3) ... - Selecting previously unselected package libxml2:amd64. - Preparing to unpack .../26-libxml2_2.9.14+dfsg-1.3~deb12u1_amd64.deb ... - Unpacking libxml2:amd64 (2.9.14+dfsg-1.3~deb12u1) ... - Selecting previously unselected package libxnvctrl0:amd64. - Preparing to unpack .../27-libxnvctrl0_525.85.05-3~deb12u1_amd64.deb ... - Unpacking libxnvctrl0:amd64 (525.85.05-3~deb12u1) ... - Selecting previously unselected package ocl-icd-libopencl1:amd64. - Preparing to unpack .../28-ocl-icd-libopencl1_2.3.1-1_amd64.deb ... - Unpacking ocl-icd-libopencl1:amd64 (2.3.1-1) ... - Selecting previously unselected package libhwloc-plugins:amd64. - Preparing to unpack .../29-libhwloc-plugins_2.9.0-1_amd64.deb ... - Unpacking libhwloc-plugins:amd64 (2.9.0-1) ... - Selecting previously unselected package libpmix2:amd64. - Preparing to unpack .../30-libpmix2_4.2.2-1+deb12u1_amd64.deb ... - Unpacking libpmix2:amd64 (4.2.2-1+deb12u1) ... - Selecting previously unselected package libucx0:amd64. - Preparing to unpack .../31-libucx0_1.13.1-1_amd64.deb ... - Unpacking libucx0:amd64 (1.13.1-1) ... - Selecting previously unselected package libopenmpi3:amd64. - Preparing to unpack .../32-libopenmpi3_4.1.4-3+b1_amd64.deb ... - Unpacking libopenmpi3:amd64 (4.1.4-3+b1) ... - Selecting previously unselected package libcaf-openmpi-3:amd64. - Preparing to unpack .../33-libcaf-openmpi-3_2.10.1-1+b1_amd64.deb ... - Unpacking libcaf-openmpi-3:amd64 (2.10.1-1+b1) ... - Selecting previously unselected package libcoarrays-dev:amd64. - Preparing to unpack .../34-libcoarrays-dev_2.10.1-1+b1_amd64.deb ... - Unpacking libcoarrays-dev:amd64 (2.10.1-1+b1) ... - Selecting previously unselected package openmpi-common. - Preparing to unpack .../35-openmpi-common_4.1.4-3_all.deb ... - Unpacking openmpi-common (4.1.4-3) ... - Selecting previously unselected package openmpi-bin. - Preparing to unpack .../36-openmpi-bin_4.1.4-3+b1_amd64.deb ... - Unpacking openmpi-bin (4.1.4-3+b1) ... - Selecting previously unselected package libcoarrays-openmpi-dev:amd64. - Preparing to unpack .../37-libcoarrays-openmpi-dev_2.10.1-1+b1_amd64.deb ... - Unpacking libcoarrays-openmpi-dev:amd64 (2.10.1-1+b1) ... - Selecting previously unselected package libevent-2.1-7:amd64. - Preparing to unpack .../38-libevent-2.1-7_2.1.12-stable-8_amd64.deb ... - Unpacking libevent-2.1-7:amd64 (2.1.12-stable-8) ... - Selecting previously unselected package libevent-extra-2.1-7:amd64. - Preparing to unpack .../39-libevent-extra-2.1-7_2.1.12-stable-8_amd64.deb ... - Unpacking libevent-extra-2.1-7:amd64 (2.1.12-stable-8) ... - Selecting previously unselected package libevent-openssl-2.1-7:amd64. - Preparing to unpack .../40-libevent-openssl-2.1-7_2.1.12-stable-8_amd64.deb ... - Unpacking libevent-openssl-2.1-7:amd64 (2.1.12-stable-8) ... - Selecting previously unselected package libevent-dev. - Preparing to unpack .../41-libevent-dev_2.1.12-stable-8_amd64.deb ... - Unpacking libevent-dev (2.1.12-stable-8) ... - Selecting previously unselected package libnuma-dev:amd64. - Preparing to unpack .../42-libnuma-dev_2.0.16-1_amd64.deb ... - Unpacking libnuma-dev:amd64 (2.0.16-1) ... - Selecting previously unselected package libltdl7:amd64. - Preparing to unpack .../43-libltdl7_2.4.7-7~deb12u1_amd64.deb ... - Unpacking libltdl7:amd64 (2.4.7-7~deb12u1) ... - Selecting previously unselected package libltdl-dev:amd64. - Preparing to unpack .../44-libltdl-dev_2.4.7-7~deb12u1_amd64.deb ... - Unpacking libltdl-dev:amd64 (2.4.7-7~deb12u1) ... - Selecting previously unselected package libhwloc-dev:amd64. - Preparing to unpack .../45-libhwloc-dev_2.9.0-1_amd64.deb ... - Unpacking libhwloc-dev:amd64 (2.9.0-1) ... - Selecting previously unselected package libnl-3-dev:amd64. - Preparing to unpack .../46-libnl-3-dev_3.7.0-0.2+b1_amd64.deb ... - Unpacking libnl-3-dev:amd64 (3.7.0-0.2+b1) ... - Selecting previously unselected package libnl-route-3-dev:amd64. - Preparing to unpack .../47-libnl-route-3-dev_3.7.0-0.2+b1_amd64.deb ... - Unpacking libnl-route-3-dev:amd64 (3.7.0-0.2+b1) ... - Selecting previously unselected package libibverbs-dev:amd64. - Preparing to unpack .../48-libibverbs-dev_44.0-2_amd64.deb ... - Unpacking libibverbs-dev:amd64 (44.0-2) ... - Selecting previously unselected package libjs-jquery. - Preparing to unpack .../49-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... - Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... - Selecting previously unselected package libjs-jquery-ui. - Preparing to unpack .../50-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... - Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... - Selecting previously unselected package zlib1g-dev:amd64. - Preparing to unpack .../51-zlib1g-dev_1%3a1.2.13.dfsg-1_amd64.deb ... - Unpacking zlib1g-dev:amd64 (1:1.2.13.dfsg-1) ... - Selecting previously unselected package libpmix-dev:amd64. - Preparing to unpack .../52-libpmix-dev_4.2.2-1+deb12u1_amd64.deb ... - Unpacking libpmix-dev:amd64 (4.2.2-1+deb12u1) ... - Selecting previously unselected package libopenmpi-dev:amd64. - Preparing to unpack .../53-libopenmpi-dev_4.1.4-3+b1_amd64.deb ... - Unpacking libopenmpi-dev:amd64 (4.1.4-3+b1) ... - Selecting previously unselected package libpkgconf3:amd64. - Preparing to unpack .../54-libpkgconf3_1.8.1-1_amd64.deb ... - Unpacking libpkgconf3:amd64 (1.8.1-1) ... - Selecting previously unselected package libtool. - Preparing to unpack .../55-libtool_2.4.7-7~deb12u1_all.deb ... - Unpacking libtool (2.4.7-7~deb12u1) ... - Selecting previously unselected package mpi-default-dev. - Preparing to unpack .../56-mpi-default-dev_1.14_amd64.deb ... - Unpacking mpi-default-dev (1.14) ... - Selecting previously unselected package pkgconf-bin. - Preparing to unpack .../57-pkgconf-bin_1.8.1-1_amd64.deb ... - Unpacking pkgconf-bin (1.8.1-1) ... - Selecting previously unselected package pkgconf:amd64. - Preparing to unpack .../58-pkgconf_1.8.1-1_amd64.deb ... - Unpacking pkgconf:amd64 (1.8.1-1) ... - Selecting previously unselected package pkg-config:amd64. - Preparing to unpack .../59-pkg-config_1.8.1-1_amd64.deb ... - Unpacking pkg-config:amd64 (1.8.1-1) ... - Setting up javascript-common (11+nmu1) ... - Setting up libpciaccess0:amd64 (0.17-2) ... - Setting up libicu72:amd64 (72.1-3) ... - Setting up libmagic-mgc (1:5.44-3) ... - Setting up libmagic1:amd64 (1:5.44-3) ... - Setting up m4 (1.4.19-3) ... - Setting up file (1:5.44-3) ... - Setting up libnuma-dev:amd64 (2.0.16-1) ... - Setting up libxnvctrl0:amd64 (525.85.05-3~deb12u1) ... - Setting up autotools-dev (20220109.1) ... - Setting up libpkgconf3:amd64 (1.8.1-1) ... - Setting up libmunge2 (0.5.15-2) ... - Setting up libhwloc15:amd64 (2.9.0-1) ... - Setting up libevent-core-2.1-7:amd64 (2.1.12-stable-8) ... - Setting up libevent-2.1-7:amd64 (2.1.12-stable-8) ... - Setting up pkgconf-bin (1.8.1-1) ... - Setting up libltdl7:amd64 (2.4.7-7~deb12u1) ... - Setting up libgfortran5:amd64 (12.2.0-14) ... - Setting up autoconf (2.71-3) ... - Setting up zlib1g-dev:amd64 (1:1.2.13.dfsg-1) ... - Setting up ocl-icd-libopencl1:amd64 (2.3.1-1) ... - Setting up libnl-3-200:amd64 (3.7.0-0.2+b1) ... - Setting up libpsm2-2 (11.2.185-2) ... - Setting up openmpi-common (4.1.4-3) ... - Setting up libpsm-infinipath1 (3.3+20.604758e7-6.2) ... - update-alternatives: using /usr/lib/libpsm1/libpsm_infinipath.so.1.16 to provide /usr/lib/x86_64-linux-gnu/libpsm_infinipath.so.1 (libpsm_infinipath.so.1) in auto mode - Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... - Setting up libxml2:amd64 (2.9.14+dfsg-1.3~deb12u1) ... - Setting up libevent-pthreads-2.1-7:amd64 (2.1.12-stable-8) ... - Setting up automake (1:1.16.5-1.3) ... - update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode - Setting up libevent-extra-2.1-7:amd64 (2.1.12-stable-8) ... - Setting up libtool (2.4.7-7~deb12u1) ... - Setting up libevent-openssl-2.1-7:amd64 (2.1.12-stable-8) ... - Setting up libgfortran-12-dev:amd64 (12.2.0-14) ... - Setting up libhwloc-plugins:amd64 (2.9.0-1) ... - Setting up pkgconf:amd64 (1.8.1-1) ... - Setting up libnl-route-3-200:amd64 (3.7.0-0.2+b1) ... - Setting up libltdl-dev:amd64 (2.4.7-7~deb12u1) ... - Setting up gfortran-12 (12.2.0-14) ... - Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... - Setting up libevent-dev (2.1.12-stable-8) ... - Setting up pkg-config:amd64 (1.8.1-1) ... - Setting up libnl-3-dev:amd64 (3.7.0-0.2+b1) ... - Setting up libhwloc-dev:amd64 (2.9.0-1) ... - Setting up libibverbs1:amd64 (44.0-2) ... - Setting up libpmix2:amd64 (4.2.2-1+deb12u1) ... - Setting up ibverbs-providers:amd64 (44.0-2) ... - Setting up gfortran (4:12.2.0-3) ... - update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode - update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode - Setting up libnl-route-3-dev:amd64 (3.7.0-0.2+b1) ... - Setting up libpmix-dev:amd64 (4.2.2-1+deb12u1) ... - Setting up librdmacm1:amd64 (44.0-2) ... - Setting up libucx0:amd64 (1.13.1-1) ... - Setting up libcoarrays-dev:amd64 (2.10.1-1+b1) ... - Setting up libibverbs-dev:amd64 (44.0-2) ... - Setting up libfabric1:amd64 (1.17.0-3) ... - Setting up libopenmpi3:amd64 (4.1.4-3+b1) ... - Setting up libcaf-openmpi-3:amd64 (2.10.1-1+b1) ... - Setting up openmpi-bin (4.1.4-3+b1) ... - update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode - update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode - Setting up libcoarrays-openmpi-dev:amd64 (2.10.1-1+b1) ... - update-alternatives: using /usr/lib/x86_64-linux-gnu/open-coarrays/openmpi/bin/caf to provide /usr/bin/caf.openmpi (caf-openmpi) in auto mode - update-alternatives: using /usr/bin/caf.openmpi to provide /usr/bin/caf (caf) in auto mode - Setting up libopenmpi-dev:amd64 (4.1.4-3+b1) ... - update-alternatives: using /usr/lib/x86_64-linux-gnu/openmpi/include to provide /usr/include/x86_64-linux-gnu/mpi (mpi-x86_64-linux-gnu) in auto mode - Setting up mpi-default-dev (1.14) ... - Processing triggers for libc-bin (2.36-9+deb12u8) ... <><> Processing actions <><><><><><><><><><><><><><><><><><><><><><><><><><><><> -> retrieved conf-mpi.1 (cached) Processing 3/9: Processing 4/9: [conf-pkg-config: pkg-config] -> retrieved mpi.1.03 (cached) + /usr/bin/pkg-config "--help" (CWD=/home/opam/.opam/5.1/.opam-switch/build/conf-pkg-config.3) - usage: pkgconf [OPTIONS] [LIBRARIES] - - basic options: - - --help this message - --about print pkgconf version and license to stdout - --version print supported pkg-config version to stdout - --atleast-pkgconfig-version check whether or not pkgconf is compatible - with a specified pkg-config version - --errors-to-stdout print all errors on stdout instead of stderr - --print-errors ensure all errors are printed - --short-errors be less verbose about some errors - --silence-errors explicitly be silent about errors - --list-all list all known packages - --list-package-names list all known package names - --simulate simulate walking the calculated dependency graph - --no-cache do not cache already seen packages when - walking the dependency graph - --log-file=filename write an audit log to a specified file - --with-path=path adds a directory to the search path - --define-prefix override the prefix variable with one that is guessed based on - the location of the .pc file - --dont-define-prefix do not override the prefix variable under any circumstances - --prefix-variable=varname sets the name of the variable that pkgconf considers - to be the package prefix - --relocate=path relocates a path and exits (mostly for testsuite) - --dont-relocate-paths disables path relocation support - - cross-compilation personality support: - - --personality=triplet|filename sets the personality to 'triplet' or a file named 'filename' - --dump-personality dumps details concerning selected personality - - checking specific pkg-config database entries: - - --atleast-version require a specific version of a module - --exact-version require an exact version of a module - --max-version require a maximum version of a module - --exists check whether or not a module exists - --uninstalled check whether or not an uninstalled module will be used - --no-uninstalled never use uninstalled modules when satisfying dependencies - --no-provides do not use 'provides' rules to resolve dependencies - --maximum-traverse-depth maximum allowed depth for dependency graph - --static be more aggressive when computing dependency graph - (for static linking) - --shared use a simplified dependency graph (usually default) - --pure optimize a static dependency graph as if it were a normal - dependency graph - --env-only look only for package entries in PKG_CONFIG_PATH - --ignore-conflicts ignore 'conflicts' rules in modules - --validate validate specific .pc files for correctness - - querying specific pkg-config database fields: - - --define-variable=varname=value define variable 'varname' as 'value' - --variable=varname print specified variable entry to stdout - --cflags print required CFLAGS to stdout - --cflags-only-I print required include-dir CFLAGS to stdout - --cflags-only-other print required non-include-dir CFLAGS to stdout - --libs print required linker flags to stdout - --libs-only-L print required LDPATH linker flags to stdout - --libs-only-l print required LIBNAME linker flags to stdout - --libs-only-other print required other linker flags to stdout - --print-requires print required dependency frameworks to stdout - --print-requires-private print required dependency frameworks for static - linking to stdout - --print-provides print provided dependencies to stdout - --print-variables print all known variables in module to stdout - --digraph print entire dependency graph in graphviz 'dot' format - --keep-system-cflags keep -I/usr/include entries in cflags output - --keep-system-libs keep -L/lib:/lib/i386-linux-gnu:/lib/x86_64-linux-gnu:/lib/x86_64-linux-gnux32:/lib32:/libx32:/usr/lib:/usr/lib/i386-linux-gnu:/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnux32:/usr/lib32:/usr/libx32 entries in libs output - --path show the exact filenames for any matching .pc files - --modversion print the specified module's version to stdout - --internal-cflags do not filter 'internal' cflags from output - - filtering output: - - --msvc-syntax print translatable fragments in MSVC syntax - --fragment-filter=types filter output fragments to the specified types - - report bugs to <https://github.com/pkgconf/pkgconf/issues/new>. -> compiled conf-pkg-config.3 -> installed conf-pkg-config.3 Processing 6/9: [conf-mpi: sh configure] + /usr/bin/sh "configure" "linux" (CWD=/home/opam/.opam/5.1/.opam-switch/build/conf-mpi.1) -> compiled conf-mpi.1 -> installed conf-mpi.1 [mpi: patch] applying post103.patch Processing 8/9: [mpi: patch] Processing 8/9: [mpi: make all] + /usr/bin/make "all" "opt" "MPIINCDIR=/usr/lib/x86_64-linux-gnu/openmpi/include" "MPILIBDIR=/usr/lib/x86_64-linux-gnu/openmpi/lib/lib" "MPICC=/usr/lib/x86_64-linux-gnu/openmpi/lib/bin/mpicc" "MPIRUN=/usr/lib/x86_64-linux-gnu/openmpi/lib/bin/mpirun" (CWD=/home/opam/.opam/5.1/.opam-switch/build/mpi.1.03) - cc -I`ocamlc -where` -I/usr/lib/x86_64-linux-gnu/openmpi/include -O2 -g -Wall -c -o init.o init.c - init.c: In function 'caml_mpi_error_handler': - init.c:37:9: warning: implicit declaration of function 'copy_string'; did you mean 'caml_copy_string'? [-Wimplicit-function-declaration] - 37 | msg = copy_string(errmsg); - | ^~~~~~~~~~~ - | caml_copy_string - init.c:39:18: warning: assignment discards 'const' qualifier from pointer target type [-Wdiscarded-qualifiers] - 39 | caml_mpi_exn = caml_named_value("Mpi.Error"); - | ^ - init.c:41:7: warning: implicit declaration of function 'invalid_argument'; did you mean 'caml_invalid_argument'? [-Wimplicit-function-declaration] - 41 | invalid_argument("Exception MPI.Error not initialized"); - | ^~~~~~~~~~~~~~~~ - | caml_invalid_argument - init.c:43:3: warning: implicit declaration of function 'raise_with_arg'; did you mean 'caml_raise_with_arg'? [-Wimplicit-function-declaration] - 43 | raise_with_arg(*caml_mpi_exn, msg); - | ^~~~~~~~~~~~~~ - | caml_raise_with_arg - init.c: In function 'caml_mpi_init': - init.c:55:10: warning: implicit declaration of function 'stat_alloc' [-Wimplicit-function-declaration] - 55 | argv = stat_alloc((argc + 1) * sizeof(char *)); - | ^~~~~~~~~~ - init.c:55:8: warning: assignment to 'char **' from 'int' makes pointer from integer without a cast [-Wint-conversion] - 55 | argv = stat_alloc((argc + 1) * sizeof(char *)); - | ^ - init.c:56:38: warning: assignment discards 'const' qualifier from pointer target type [-Wdiscarded-qualifiers] - 56 | for (i = 0; i < argc; i++) argv[i] = String_val(Field(arguments, i)); - | ^ - init.c:62:12: error: 'MPI_Handler_function' undeclared (first use in this function); did you mean 'MPI_User_function'? - 62 | (MPI_Handler_function *)caml_mpi_error_handler, &hdlr); - | ^~~~~~~~~~~~~~~~~~~~ - | MPI_User_function - init.c:62:12: note: each undeclared identifier is reported only once for each function it appears in - init.c:62:34: error: expected expression before ')' token - 62 | (MPI_Handler_function *)caml_mpi_error_handler, &hdlr); - | ^ - init.c:61:3: error: too few arguments to function 'MPI_Comm_create_errhandler' - 61 | MPI_Comm_create_errhandler( - | ^~~~~~~~~~~~~~~~~~~~~~~~~~ - In file included from init.c:18: - /usr/lib/x86_64-linux-gnu/openmpi/include/mpi.h:1377:20: note: declared here - 1377 | OMPI_DECLSPEC int MPI_Comm_create_errhandler(MPI_Comm_errhandler_function *function, - | ^~~~~~~~~~~~~~~~~~~~~~~~~~ - init.c: In function 'caml_mpi_wtime': - init.c:79:10: warning: implicit declaration of function 'copy_double'; did you mean 'caml_copy_double'? [-Wimplicit-function-declaration] - 79 | return copy_double(MPI_Wtime()); - | ^~~~~~~~~~~ - | caml_copy_double - init.c: At top level: - init.c:30:13: warning: 'caml_mpi_error_handler' defined but not used [-Wunused-function] - 30 | static void caml_mpi_error_handler(MPI_Comm * comm, int * errcode, ...) - | ^~~~~~~~~~~~~~~~~~~~~~ - make: *** [<builtin>: init.o] Error 1 [ERROR] The compilation of mpi.1.03 failed at "make all opt MPIINCDIR=/usr/lib/x86_64-linux-gnu/openmpi/include MPILIBDIR=/usr/lib/x86_64-linux-gnu/openmpi/lib/lib MPICC=/usr/lib/x86_64-linux-gnu/openmpi/lib/bin/mpicc MPIRUN=/usr/lib/x86_64-linux-gnu/openmpi/lib/bin/mpirun". #=== ERROR while compiling mpi.1.03 ===========================================# # context 2.1.6 | linux/x86_64 | ocaml-base-compiler.5.1.1 | file:///src # path ~/.opam/5.1/.opam-switch/build/mpi.1.03 # command /usr/bin/make all opt MPIINCDIR=/usr/lib/x86_64-linux-gnu/openmpi/include MPILIBDIR=/usr/lib/x86_64-linux-gnu/openmpi/lib/lib MPICC=/usr/lib/x86_64-linux-gnu/openmpi/lib/bin/mpicc MPIRUN=/usr/lib/x86_64-linux-gnu/openmpi/lib/bin/mpirun # exit-code 2 # env-file ~/.opam/log/mpi-115-29e289.env # output-file ~/.opam/log/mpi-115-29e289.out ### output ### # cc -I`ocamlc -where` -I/usr/lib/x86_64-linux-gnu/openmpi/include -O2 -g -Wall -c -o init.o init.c # init.c: In function 'caml_mpi_error_handler': # init.c:37:9: warning: implicit declaration of function 'copy_string'; did you mean 'caml_copy_string'? [-Wimplicit-function-declaration] # 37 | msg = copy_string(errmsg); # | ^~~~~~~~~~~ # | caml_copy_string # init.c:39:18: warning: assignment discards 'const' qualifier from pointer target type [-Wdiscarded-qualifiers] # 39 | caml_mpi_exn = caml_named_value("Mpi.Error"); # | ^ # init.c:41:7: warning: implicit declaration of function 'invalid_argument'; did you mean 'caml_invalid_argument'? [-Wimplicit-function-declaration] # 41 | invalid_argument("Exception MPI.Error not initialized"); # | ^~~~~~~~~~~~~~~~ # | caml_invalid_argument # init.c:43:3: warning: implicit declaration of function 'raise_with_arg'; did you mean 'caml_raise_with_arg'? [-Wimplicit-function-declaration] # 43 | raise_with_arg(*caml_mpi_exn, msg); # | ^~~~~~~~~~~~~~ # | caml_raise_with_arg # init.c: In function 'caml_mpi_init': # init.c:55:10: warning: implicit declaration of function 'stat_alloc' [-Wimplicit-function-declaration] # 55 | argv = stat_alloc((argc + 1) * sizeof(char *)); # | ^~~~~~~~~~ # init.c:55:8: warning: assignment to 'char **' from 'int' makes pointer from integer without a cast [-Wint-conversion] # 55 | argv = stat_alloc((argc + 1) * sizeof(char *)); # | ^ # init.c:56:38: warning: assignment discards 'const' qualifier from pointer target type [-Wdiscarded-qualifiers] # 56 | for (i = 0; i < argc; i++) argv[i] = String_val(Field(arguments, i)); # | ^ # init.c:62:12: error: 'MPI_Handler_function' undeclared (first use in this function); did you mean 'MPI_User_function'? # 62 | (MPI_Handler_function *)caml_mpi_error_handler, &hdlr); # | ^~~~~~~~~~~~~~~~~~~~ # | MPI_User_function # init.c:62:12: note: each undeclared identifier is reported only once for each function it appears in # init.c:62:34: error: expected expression before ')' token # 62 | (MPI_Handler_function *)caml_mpi_error_handler, &hdlr); # | ^ # init.c:61:3: error: too few arguments to function 'MPI_Comm_create_errhandler' # 61 | MPI_Comm_create_errhandler( # | ^~~~~~~~~~~~~~~~~~~~~~~~~~ # In file included from init.c:18: # /usr/lib/x86_64-linux-gnu/openmpi/include/mpi.h:1377:20: note: declared here # 1377 | OMPI_DECLSPEC int MPI_Comm_create_errhandler(MPI_Comm_errhandler_function *function, # | ^~~~~~~~~~~~~~~~~~~~~~~~~~ # init.c: In function 'caml_mpi_wtime': # init.c:79:10: warning: implicit declaration of function 'copy_double'; did you mean 'caml_copy_double'? [-Wimplicit-function-declaration] # 79 | return copy_double(MPI_Wtime()); # | ^~~~~~~~~~~ # | caml_copy_double # init.c: At top level: # init.c:30:13: warning: 'caml_mpi_error_handler' defined but not used [-Wunused-function] # 30 | static void caml_mpi_error_handler(MPI_Comm * comm, int * errcode, ...) # | ^~~~~~~~~~~~~~~~~~~~~~ # make: *** [<builtin>: init.o] Error 1 <><> Error report <><><><><><><><><><><><><><><><><><><><><><><><><><><><><><><> +- The following actions failed | - build mpi 1.03 +- +- The following changes have been performed | - install conf-mpi 1 | - install conf-pkg-config 3 +- # Run eval $(opam env) to update the current shell environment The former state can be restored with: /usr/bin/opam switch import "/home/opam/.opam/5.1/.opam-switch/backup/state-20240912093819.export" 'opam --cli=2.1 install mpi.1.03 ocamlfind.1.9.6 host-arch-x86_64.1 conf-pkg-config.3 conf-mpi.1 --verbose --yes --confirm-level=unsafe-yes' failed.