package jupyter-kernel

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  1. Error log

jupyter-kernel 0.4

Error log

The package failed to build. The error log from opam follows.

[NOTE] Package dune is already installed (current version is 3.17.2).
[NOTE] Package ocamlfind is already installed (current version is 1.9.8).
The following actions will be performed:
=== install 42 packages
  - install atd                 2.16.0
  - install atdgen              2.16.0
  - install atdgen-runtime      2.16.0
  - install base-bytes          base
  - install bigarray-compat     1.1.0
  - install biniou              1.2.2
  - install camlp-streams       5.0.1
  - install cmdliner            1.3.0
  - install conf-pkg-config     4
  - install conf-zmq            0.1
  - install cppo                1.8.0
  - install csexp               1.5.2
  - install digestif            1.2.0
  - install dune-configurator   3.17.2
  - install easy-format         1.3.4
  - install eqaf                0.10
  - install ISO8601             0.2.6
  - install jupyter-kernel      0.4
  - install lwt                 4.5.0
  - install lwt-zmq             2.1.0 (deprecated)
  - install lwt_ppx             2.1.0
  - install menhir              20240715
  - install menhirCST           20240715
  - install menhirLib           20240715
  - install menhirSdk           20240715
  - install mmap                1.2.0
  - install ocaml-compiler-libs v0.12.4
  - install ocamlbuild          0.15.0
  - install ocplib-endian       1.2
  - install ppx_derivers        1.2.1
  - install ppxlib              0.35.0
  - install re                  1.11.0
  - install result              1.5
  - install seq                 base
  - install sexplib0            v0.16.0
  - install stdint              0.7.2
  - install stdlib-shims        0.3.0
  - install topkg               1.0.7
  - install uuidm               0.9.8
  - install uutf                1.0.3
  - install yojson              2.2.2
  - install zmq                 4.0-8

The following system packages will first need to be installed:
    libzmq3-dev pkg-config

<><> Handling external dependencies <><><><><><><><><><><><><><><><><><><><><><>

opam believes some required external dependencies are missing. opam can:
> 1. Run apt-get to install them (may need root/sudo access)
  2. Display the recommended apt-get command and wait while you run it manually (e.g. in another terminal)
  3. Continue anyway, and, upon success, permanently register that this external dependency is present, but not detectable
  4. Abort the installation

[1/2/3/4] 1

+ /usr/bin/sudo "apt-get" "install" "-qq" "-yy" "libzmq3-dev" "pkg-config"
- debconf: delaying package configuration, since apt-utils is not installed
- Selecting previously unselected package comerr-dev:amd64.
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(Reading database ... 18745 files and directories currently installed.)
- Preparing to unpack .../00-comerr-dev_2.1-1.47.0-2_amd64.deb ...
- Unpacking comerr-dev:amd64 (2.1-1.47.0-2) ...
- Selecting previously unselected package libnorm1:amd64.
- Preparing to unpack .../01-libnorm1_1.5.9+dfsg-2_amd64.deb ...
- Unpacking libnorm1:amd64 (1.5.9+dfsg-2) ...
- Selecting previously unselected package libpgm-5.3-0:amd64.
- Preparing to unpack .../02-libpgm-5.3-0_5.3.128~dfsg-2_amd64.deb ...
- Unpacking libpgm-5.3-0:amd64 (5.3.128~dfsg-2) ...
- Selecting previously unselected package libsodium23:amd64.
- Preparing to unpack .../03-libsodium23_1.0.18-1_amd64.deb ...
- Unpacking libsodium23:amd64 (1.0.18-1) ...
- Selecting previously unselected package libzmq5:amd64.
- Preparing to unpack .../04-libzmq5_4.3.4-6_amd64.deb ...
- Unpacking libzmq5:amd64 (4.3.4-6) ...
- Selecting previously unselected package libpgm-dev:amd64.
- Preparing to unpack .../05-libpgm-dev_5.3.128~dfsg-2_amd64.deb ...
- Unpacking libpgm-dev:amd64 (5.3.128~dfsg-2) ...
- Selecting previously unselected package libsodium-dev:amd64.
- Preparing to unpack .../06-libsodium-dev_1.0.18-1_amd64.deb ...
- Unpacking libsodium-dev:amd64 (1.0.18-1) ...
- Selecting previously unselected package libicu72:amd64.
- Preparing to unpack .../07-libicu72_72.1-3_amd64.deb ...
- Unpacking libicu72:amd64 (72.1-3) ...
- Selecting previously unselected package icu-devtools.
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- Unpacking icu-devtools (72.1-3) ...
- Selecting previously unselected package libicu-dev:amd64.
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- Unpacking libicu-dev:amd64 (72.1-3) ...
- Selecting previously unselected package libxml2:amd64.
- Preparing to unpack .../10-libxml2_2.9.14+dfsg-1.3~deb12u1_amd64.deb ...
- Unpacking libxml2:amd64 (2.9.14+dfsg-1.3~deb12u1) ...
- Selecting previously unselected package libxml2-dev:amd64.
- Preparing to unpack .../11-libxml2-dev_2.9.14+dfsg-1.3~deb12u1_amd64.deb ...
- Unpacking libxml2-dev:amd64 (2.9.14+dfsg-1.3~deb12u1) ...
- Selecting previously unselected package libnorm-dev:amd64.
- Preparing to unpack .../12-libnorm-dev_1.5.9+dfsg-2_amd64.deb ...
- Unpacking libnorm-dev:amd64 (1.5.9+dfsg-2) ...
- Selecting previously unselected package libgssrpc4:amd64.
- Preparing to unpack .../13-libgssrpc4_1.20.1-2+deb12u2_amd64.deb ...
- Unpacking libgssrpc4:amd64 (1.20.1-2+deb12u2) ...
- Selecting previously unselected package libkdb5-10:amd64.
- Preparing to unpack .../14-libkdb5-10_1.20.1-2+deb12u2_amd64.deb ...
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- Unpacking libkadm5clnt-mit12:amd64 (1.20.1-2+deb12u2) ...
- Selecting previously unselected package krb5-multidev:amd64.
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- Unpacking libkrb5-dev:amd64 (1.20.1-2+deb12u2) ...
- Selecting previously unselected package libmd-dev:amd64.
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- Unpacking libmd-dev:amd64 (1.0.4-2) ...
- Selecting previously unselected package libbsd-dev:amd64.
- Preparing to unpack .../20-libbsd-dev_0.11.7-2_amd64.deb ...
- Unpacking libbsd-dev:amd64 (0.11.7-2) ...
- Selecting previously unselected package libzmq3-dev:amd64.
- Preparing to unpack .../21-libzmq3-dev_4.3.4-6_amd64.deb ...
- Unpacking libzmq3-dev:amd64 (4.3.4-6) ...
- Selecting previously unselected package cppzmq-dev:amd64.
- Preparing to unpack .../22-cppzmq-dev_4.9.0-1_amd64.deb ...
- Unpacking cppzmq-dev:amd64 (4.9.0-1) ...
- Selecting previously unselected package libpkgconf3:amd64.
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- Unpacking libpkgconf3:amd64 (1.8.1-1) ...
- Selecting previously unselected package pkgconf-bin.
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- Selecting previously unselected package pkg-config:amd64.
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- Unpacking pkg-config:amd64 (1.8.1-1) ...
- Setting up libsodium23:amd64 (1.0.18-1) ...
- Setting up libicu72:amd64 (72.1-3) ...
- Setting up libpgm-5.3-0:amd64 (5.3.128~dfsg-2) ...
- Setting up libnorm1:amd64 (1.5.9+dfsg-2) ...
- Setting up libgssrpc4:amd64 (1.20.1-2+deb12u2) ...
- Setting up libpkgconf3:amd64 (1.8.1-1) ...
- Setting up libpgm-dev:amd64 (5.3.128~dfsg-2) ...
- Setting up comerr-dev:amd64 (2.1-1.47.0-2) ...
- Setting up icu-devtools (72.1-3) ...
- Setting up pkgconf-bin (1.8.1-1) ...
- Setting up libsodium-dev:amd64 (1.0.18-1) ...
- Setting up libmd-dev:amd64 (1.0.4-2) ...
- Setting up libicu-dev:amd64 (72.1-3) ...
- Setting up libxml2:amd64 (2.9.14+dfsg-1.3~deb12u1) ...
- Setting up libbsd-dev:amd64 (0.11.7-2) ...
- Setting up libkadm5clnt-mit12:amd64 (1.20.1-2+deb12u2) ...
- Setting up libkdb5-10:amd64 (1.20.1-2+deb12u2) ...
- Setting up libzmq5:amd64 (4.3.4-6) ...
- Setting up pkgconf:amd64 (1.8.1-1) ...
- Setting up libxml2-dev:amd64 (2.9.14+dfsg-1.3~deb12u1) ...
- Setting up pkg-config:amd64 (1.8.1-1) ...
- Setting up libkadm5srv-mit12:amd64 (1.20.1-2+deb12u2) ...
- Setting up krb5-multidev:amd64 (1.20.1-2+deb12u2) ...
- Setting up libnorm-dev:amd64 (1.5.9+dfsg-2) ...
- Setting up libkrb5-dev:amd64 (1.20.1-2+deb12u2) ...
- Setting up libzmq3-dev:amd64 (4.3.4-6) ...
- Setting up cppzmq-dev:amd64 (4.9.0-1) ...
- Processing triggers for libc-bin (2.36-9+deb12u9) ...

<><> Processing actions <><><><><><><><><><><><><><><><><><><><><><><><><><><><>
-> installed base-bytes.base
-> retrieved bigarray-compat.1.1.0  (cached)
-> retrieved biniou.1.2.2  (cached)
-> retrieved camlp-streams.5.0.1  (cached)
-> retrieved conf-zmq.0.1  (cached)
-> installed conf-pkg-config.4
-> retrieved cmdliner.1.3.0  (cached)
-> retrieved cppo.1.8.0  (cached)
-> installed conf-zmq.0.1
-> retrieved csexp.1.5.2  (cached)
-> installed bigarray-compat.1.1.0
-> retrieved atd.2.16.0, atdgen.2.16.0, atdgen-runtime.2.16.0  (cached)
-> installed camlp-streams.5.0.1
-> retrieved digestif.1.2.0  (cached)
-> retrieved dune-configurator.3.17.2  (cached)
-> retrieved easy-format.1.3.4  (cached)
-> retrieved eqaf.0.10  (cached)
-> retrieved ISO8601.0.2.6  (cached)
-> retrieved jupyter-kernel.0.4  (cached)
-> retrieved lwt.4.5.0  (cached)
-> retrieved lwt-zmq.2.1.0  (cached)
-> installed cmdliner.1.3.0
-> installed cppo.1.8.0
-> installed csexp.1.5.2
-> installed easy-format.1.3.4
-> installed eqaf.0.10
-> installed ISO8601.0.2.6
-> retrieved lwt_ppx.2.1.0  (cached)
-> retrieved menhir.20240715, menhirCST.20240715, menhirLib.20240715, menhirSdk.20240715  (cached)
-> retrieved mmap.1.2.0  (cached)
-> installed biniou.1.2.2
-> installed digestif.1.2.0
-> retrieved ocaml-compiler-libs.v0.12.4  (cached)
-> retrieved ocamlbuild.0.15.0  (cached)
-> installed menhirCST.20240715
-> retrieved ocplib-endian.1.2  (cached)
-> installed mmap.1.2.0
-> retrieved ppx_derivers.1.2.1  (cached)
-> retrieved result.1.5  (cached)
-> retrieved seq.base  (cached)
-> installed seq.base
-> retrieved re.1.11.0  (cached)
-> retrieved sexplib0.v0.16.0  (cached)
-> retrieved stdint.0.7.2  (cached)
-> retrieved ppxlib.0.35.0  (cached)
-> installed menhirSdk.20240715
-> retrieved stdlib-shims.0.3.0  (cached)
-> retrieved topkg.1.0.7  (cached)
-> retrieved uuidm.0.9.8  (cached)
-> retrieved uutf.1.0.3  (cached)
-> retrieved zmq.4.0-8  (cached)
-> retrieved yojson.2.2.2  (cached)
-> installed menhirLib.20240715
-> installed ocplib-endian.1.2
-> installed ppx_derivers.1.2.1
-> installed result.1.5
-> installed stdlib-shims.0.3.0
-> installed sexplib0.v0.16.0
-> installed ocaml-compiler-libs.v0.12.4
-> installed re.1.11.0
-> installed stdint.0.7.2
-> installed dune-configurator.3.17.2
-> installed yojson.2.2.2
-> installed atdgen-runtime.2.16.0
-> installed lwt.4.5.0
-> installed ocamlbuild.0.15.0
-> installed topkg.1.0.7
-> installed uuidm.0.9.8
-> installed uutf.1.0.3
-> installed zmq.4.0-8
-> installed menhir.20240715
-> installed ppxlib.0.35.0
-> installed atd.2.16.0
-> installed lwt_ppx.2.1.0
-> installed atdgen.2.16.0
-> installed lwt-zmq.2.1.0
[ERROR] The compilation of jupyter-kernel.0.4 failed at "dune build @install -p jupyter-kernel -j 255".

#=== ERROR while compiling jupyter-kernel.0.4 =================================#
# context              2.3.0 | linux/x86_64 | ocaml-base-compiler.4.11.2 | file:///src
# path                 ~/.opam/4.11/.opam-switch/build/jupyter-kernel.0.4
# command              ~/.opam/4.11/bin/dune build @install -p jupyter-kernel -j 255
# exit-code            1
# env-file             ~/.opam/log/jupyter-kernel-113-2c9bee.env
# output-file          ~/.opam/log/jupyter-kernel-113-2c9bee.out
### output ###
# File "src/dune", line 5, characters 20-26:
# 5 |   (libraries result atdgen yojson uuidm ZMQ lwt-zmq
#                         ^^^^^^
# Error: Library "atdgen" not found.
# -> required by library "jupyter-kernel" in _build/default/src
# -> required by _build/default/META.jupyter-kernel
# -> required by _build/install/default/lib/jupyter-kernel/META
# -> required by _build/default/jupyter-kernel.install
# -> required by alias install



<><> Error report <><><><><><><><><><><><><><><><><><><><><><><><><><><><><><><>
+- The following actions failed
| - build jupyter-kernel 0.4
+- 
+- The following changes have been performed
| - install atd                 2.16.0
| - install atdgen              2.16.0
| - install atdgen-runtime      2.16.0
| - install base-bytes          base
| - install bigarray-compat     1.1.0
| - install biniou              1.2.2
| - install camlp-streams       5.0.1
| - install cmdliner            1.3.0
| - install conf-pkg-config     4
| - install conf-zmq            0.1
| - install cppo                1.8.0
| - install csexp               1.5.2
| - install digestif            1.2.0
| - install dune-configurator   3.17.2
| - install easy-format         1.3.4
| - install eqaf                0.10
| - install ISO8601             0.2.6
| - install lwt                 4.5.0
| - install lwt-zmq             2.1.0
| - install lwt_ppx             2.1.0
| - install menhir              20240715
| - install menhirCST           20240715
| - install menhirLib           20240715
| - install menhirSdk           20240715
| - install mmap                1.2.0
| - install ocaml-compiler-libs v0.12.4
| - install ocamlbuild          0.15.0
| - install ocplib-endian       1.2
| - install ppx_derivers        1.2.1
| - install ppxlib              0.35.0
| - install re                  1.11.0
| - install result              1.5
| - install seq                 base
| - install sexplib0            v0.16.0
| - install stdint              0.7.2
| - install stdlib-shims        0.3.0
| - install topkg               1.0.7
| - install uuidm               0.9.8
| - install uutf                1.0.3
| - install yojson              2.2.2
| - install zmq                 4.0-8
+- 

<><> lwt-zmq.2.1.0 installed successfully <><><><><><><><><><><><><><><><><><><>
=> Note: This package is deprecated.

<><> lwt.4.5.0 installed successfully <><><><><><><><><><><><><><><><><><><><><>
=> Lwt 5.0.0 will make some breaking changes in December 2019. See
     https://github.com/ocsigen/lwt/issues/584
# To update the current shell environment, run: eval $(opam env)

The former state can be restored with:
    /usr/bin/opam switch import "/home/opam/.opam/4.11/.opam-switch/backup/state-20250206024807.export"
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