hlarp 0.0.1

Error log

The package failed to build. The error log from opam follows.

[NOTE] Package ocamlfind is already installed (current version is 1.9.6).
The following actions will be performed:
=== install 7 packages
  - install base-bytes base
  - install cmdliner   1.3.0
  - install hlarp      0.0.1
  - install jbuilder   1.0+beta20.2 (deprecated)
  - install nonstd     0.0.3
  - install ocamlbuild 0.15.0
  - install re         1.7.1

<><> Processing actions <><><><><><><><><><><><><><><><><><><><><><><><><><><><>
-> installed base-bytes.base
-> retrieved cmdliner.1.3.0  (cached)
-> retrieved jbuilder.1.0+beta20.2  (cached)
-> retrieved nonstd.0.0.3  (cached)
-> retrieved ocamlbuild.0.15.0  (cached)
-> retrieved hlarp.0.0.1  (https://github.com/hammerlab/hlarp/archive/0.0.1.tar.gz)
-> retrieved re.1.7.1  (cached)
-> installed cmdliner.1.3.0
-> installed ocamlbuild.0.15.0
-> installed jbuilder.1.0+beta20.2
-> installed nonstd.0.0.3
-> installed re.1.7.1
[ERROR] The compilation of hlarp.0.0.1 failed at "make".

#=== ERROR while compiling hlarp.0.0.1 ========================================#
# context              2.3.0 | linux/x86_64 | ocaml-base-compiler.4.12.1 | file:///src
# path                 ~/.opam/4.12/.opam-switch/build/hlarp.0.0.1
# command              /usr/bin/make
# exit-code            2
# env-file             ~/.opam/log/hlarp-113-b4211a.env
# output-file          ~/.opam/log/hlarp-113-b4211a.out
### output ###
# ocamlbuild -use-ocamlfind -package nonstd -package re -package cmdliner -package re.posix -package re.glob \
#            -I src/app -I src/lib hlarp_cli.native \
#            hlarp.cma hlarp.cmxs hlarp.cmxa
# + ocamlfind ocamldep -package re.glob -package re.posix -package cmdliner -package re -package nonstd -modules src/app/hlarp_cli.ml > src/app/hlarp_cli.ml.depends
# + ocamlfind ocamldep -package re.glob -package re.posix -package cmdliner -package re -package nonstd -modules src/lib/hlarp.ml > src/lib/hlarp.ml.depends
# + ocamlfind ocamlc -c -annot -bin-annot -principal -w A-42-44-48-50 -warn-error A-42-44-48-50 -package re.glob -package re.posix -package cmdliner -package re -package nonstd -I src/lib -I src/app -o src/lib/hlarp.cmo src/lib/hlarp.ml
# + ocamlfind ocamlc -c -annot -bin-annot -principal -w A-42-44-48-50 -warn-error A-42-44-48-50 -package re.glob -package re.posix -package cmdliner -package re -package nonstd -I src/app -I src/lib -o src/app/hlarp_cli.cmo src/app/hlarp_cli.ml
# + ocamlfind ocamlc -c -annot -bin-annot -principal -w A-42-44-48-50 -warn-error A-42-44-48-50 -package re.glob -package re.posix -package cmdliner -package re -package nonstd -I src/app -I src/lib -o src/app/hlarp_cli.cmo src/app/hlarp_cli.ml
# File "src/app/hlarp_cli.ml", line 52, characters 15-19:
# 52 |     Term.(ret (pure (`Help (`Plain, None)))
#                     ^^^^
# Error (alert deprecated): Cmdliner.Term.pure
# Use Term.const instead.
# File "src/app/hlarp_cli.ml", line 53, characters 10-14:
# 53 |         , info project_name ~version ~doc ~man)
#                ^^^^
# Error (alert deprecated): Cmdliner.Term.info
# Use Cmd.info instead.
# File "src/app/hlarp_cli.ml", line 72, characters 10-14:
# 72 |         , info tool ~doc:"Parse seq2HLA output")
#                ^^^^
# Error (alert deprecated): Cmdliner.Term.info
# Use Cmd.info instead.
# File "src/app/hlarp_cli.ml", line 80, characters 10-14:
# 80 |         , info tool ~doc:"Parse OptiType output")
#                ^^^^
# Error (alert deprecated): Cmdliner.Term.info
# Use Cmd.info instead.
# File "src/app/hlarp_cli.ml", line 103, characters 10-14:
# 103 |         , info tool ~doc:"Parse ATHLATES output")
#                 ^^^^
# Error (alert deprecated): Cmdliner.Term.info
# Use Cmd.info instead.
# File "src/app/hlarp_cli.ml", line 119, characters 10-14:
# 119 |         , info "multiple"
#                 ^^^^
# Error (alert deprecated): Cmdliner.Term.info
# Use Cmd.info instead.
# File "src/app/hlarp_cli.ml", line 159, characters 10-14:
# 159 |         , info "compare"
#                 ^^^^
# Error (alert deprecated): Cmdliner.Term.info
# Use Cmd.info instead.
# File "src/app/hlarp_cli.ml", line 163, characters 8-24:
# 163 |   match Term.eval_choice help_cmd cmds with
#               ^^^^^^^^^^^^^^^^
# Error (alert deprecated): Cmdliner.Term.eval_choice
# Use Cmd.group and one of Cmd.eval* instead.
# Command exited with code 2.
# make: *** [Makefile:12: build] Error 10



<><> Error report <><><><><><><><><><><><><><><><><><><><><><><><><><><><><><><>
+- The following actions failed
| - build hlarp 0.0.1
+- 
+- The following changes have been performed
| - install base-bytes base
| - install cmdliner   1.3.0
| - install jbuilder   1.0+beta20.2
| - install nonstd     0.0.3
| - install ocamlbuild 0.15.0
| - install re         1.7.1
+- 

<><> jbuilder.1.0+beta20.2 installed successfully <><><><><><><><><><><><><><><>
=> Note: This package is deprecated.
# To update the current shell environment, run: eval $(opam env)

The former state can be restored with:
    /usr/bin/opam switch import "/home/opam/.opam/4.12/.opam-switch/backup/state-20250204165922.export"