package fftw3
Library
Module
Module type
Parameter
Class
Class type
FFT of Bigarray.Genarray.
val create :
('a, 'b) Bigarray.kind ->
'c Bigarray.layout ->
int array ->
('a, 'b, 'c) Bigarray.Genarray.t
Creates a new array, just as Bigarray.Genarray.create
does, but guarantees that it is aligned so one gets the better performance from FFTW.
Remark: In order to deserialize such a bigarray, this module must be linked to the program as the deserialization function also aligns the data.
type 'l complex_array = (Complex.t, complex_elt, 'l) Bigarray.Genarray.t
Double precision complex array.
type 'l float_array = (float, float_elt, 'l) Bigarray.Genarray.t
Double precision float array.
Coordinates of elements or dimensions of an ND array (therefore the length of such an array of coordinates must be equal to the number of dimensions of the matrix).
val dft :
dir ->
?meas:measure ->
?destroy_input:bool ->
?unaligned:bool ->
?howmany_n:int array ->
?howmanyi:coord list ->
?ni:coord ->
?ofsi:coord ->
?inci:coord ->
'l complex_array ->
?howmanyo:coord list ->
?no:coord ->
?ofso:coord ->
?inco:coord ->
'l complex_array ->
c2c plan
dft dir i o
returns a plan for computing the FFT in the direction dir
from i
to o
. i
and o
must have the same number of (logical) dimensions and may be equal. If i
, ofsi
and o
, ofso
are respectively the same, the transform is done in-place. If not, the sub-matrices should not overlap. Raises Fftw3.Sig.Failure
if the plan cannot be created.
Note that FFTW computes an unnormalized DFT: computing a forward followed by a backward transform (or vice versa) results in the original array scaled by N, the product of the lofical dimensions Array.fold_left ( * ) 1 ni
= Array.fold_left ( * ) 1 no
.
meas
controls how much time is dedicated to the creation of the plan. Default:Measure
. Beware that, unless~meas
isEstimate
, creating a plan requires some trials that will destroy the content of the arrays.
destroy_input
specifies that an out-of-place transform may overwrite its input array. Overwriting input may sometimes allow more efficient algorithms to be employed. Default:false
(i.e. perserve the content of the input array) except for c2r and HC2R.
unaligned
specifies that the algorithm may not impose any alignment requirements. You normally do not need this flag unless you want to use the plan with other unaligned arrays (using the guru interface). Default:false
meaning that alignment may be used to speed up the computations (whenin
andout
are aligned of course).
Subarrays
Fftw3 allows you to perform the FFT transform on subarrays defined by offset, strides and dimensions. (Only the offset specification is dependent on the layout, the other two are the same regardless of whether the matrix has a C or FORTRAN layout.)
ni
is the array with an entry for each dimensionk
ofi
.ni.(k)
indicates how many incrementsinci.(k)
we want to consider in the dimensionk
. Of course, theni.(k)
must be small enough so that the the subarrays fits ini
, i.e., for allk
,ofsi.(k) + (ni.(k) - 1) abs(inci.(k))
must be< dim i k
(c_layout) or<= dim i k
(fortran_layout). Ifni.(k) = 0
, it means that we want the larger dimensionni.(k)
that the choice ofofsi.(k)
andinci.(k)
allow. In this case,ni.(k)
will be overwritten with the dimension that was automatically determined. Note thatni.(k) = 1
means that the directionk
is to be ignored (i.e. thek
th index is constant with valueofsi.(k)
).
ofsi
the initial element in the input array. Default:[|0;...;0|]
for c_layout and[|1;...;1|]
for fortran_layout.
inci
an array of increments for each (physical) dimension of the input arrayi
.inci.(k)
can be negative, indicating that the rangeofsi.(k)
..ofsi.(k) + (ni.(k) - 1) abs(inc.(k))
is traversed backward. This is the same behavior is as lacaml (LAPACK). If the incrementinci.(k) = 0
, that means that the dimensionk
must be ignored (i.e. the index in dimensionk
is constant with valueofsi.(k)
). Default:[|1;...;1|]
.
no
same asni
but for output.no
must denote a transform of the same dimensions asni
i.e., neglecting the dimensions1
, the two matrices must be the same.
ofso
same asofsi
but for output.
inco
same asinci
but for output.
For example, if one wants the submatrix indicated by the stars of the following (C layout) matrix:
a = [[x x x x x x one sets: ofs = [|1; 1|] x * x * x x inc = [|1; 2|] x * x * x x dim = [|2; 2|] x x x x x x ]]
The slice represented by the stars
a = [[x * x x x x * x x x x * x x x ]]
is defined by ofs = [|0; 1|]
and inc = [|1; 0|]
Multiple transforms
FFTW allows to compute several transforms at once by specifying submatrices of i
and o
. This is more efficient than to create a different plan for each transform. It is your responsability to ensure that the many submatrices do not overlap.
howmany_n
is an array of the (logical) dimensions of the array indexing the many transforms. Default:[| |]
, i.e. only a single transform is performed. Ifhowmanyi
is given but nohowmany_n
, then the maximum dimensions possible by the dimensions ofi
(resp.o
) are used. A value of0
for a dimension also means to make it as large as possible.
howmanyi
is a list of vectors[v1;...;vp]
generating the lattice of multiple arrays. In other words, ifa
is an element of (vector) indexk
in the "first" array, then the same element in the other arrays is at indicesk + i₁ * v1 + ... + iₚ * vp
. The dimension of eachvᵢ
must be equal to the number of dimensions of the input arrayi
.
howmanyo
same ashowmanyi
but for output.
For example, for the two subarrays are identified by * and +
a = [[x * + * + x x x x x x * + * + x x x x x ]]
one sets: ofsi = [|0; 1|]
, inci = [|2; 2|]
and howmanyi
= [ [|0; 1|] ]
(or ofso
, inco
and howmanyo
if it is an output array).
val r2c :
?meas:measure ->
?destroy_input:bool ->
?unaligned:bool ->
?howmany_n:int array ->
?howmanyi:coord list ->
?ni:coord ->
?ofsi:coord ->
?inci:coord ->
'l float_array ->
?howmanyo:coord list ->
?no:coord ->
?ofso:coord ->
?inco:coord ->
'l complex_array ->
r2c plan
r2c i o
returns a plan for computing the forward transform from the real array i
to the complex array o
. Note that the last (for the C layout, or first for the fortran layout) dimension of o
must be d/2+1 where d denotes the last dimension of i
.
See Fftw3.Sig.Genarray.dft
for the meaning of the other optional parameters.
val c2r :
?meas:measure ->
?destroy_input:bool ->
?unaligned:bool ->
?howmany_n:int array ->
?howmanyi:coord list ->
?ni:coord ->
?ofsi:coord ->
?inci:coord ->
'l complex_array ->
?howmanyo:coord list ->
?no:coord ->
?ofso:coord ->
?inco:coord ->
'l float_array ->
c2r plan
c2r i o
returns a plan for computing the backward transform from the complex array i
to the complex array o
. Note that, by default, executing the plan returned by c2r
destroys the input array i
. You can use ~destroy_input:false
to generate a plan that does not modify i
at the expense of being slower — it is only possible in 1D and if no such plan can be created, Fftw3.Sig.Failure
is raised.
See Fftw3.Sig.Genarray.dft
for the meaning of the other optional parameters.
val r2r :
r2r_kind array ->
?meas:measure ->
?destroy_input:bool ->
?unaligned:bool ->
?howmany_n:int array ->
?howmanyi:coord list ->
?ni:coord ->
?ofsi:coord ->
?inci:coord ->
'l float_array ->
?howmanyo:coord list ->
?no:coord ->
?ofso:coord ->
?inco:coord ->
'l float_array ->
r2r plan
r2r kind i o
returns a plan for computing the transform from the complex array i
to the complex array o
. The type of transform along the dimension k
is given by kind.(k)
(you must give as many kinds as there are dimensions to the input array i
).
Note that the default value of destroy_input
is false
but you may want to change it to true
, especially in case one of the r2r_kind
is HC2R
in order to allow the use of more efficient algorithms. Try this if Fftw3.Sig.Failure
is raised.
See Fftw3.Sig.Genarray.dft
for the meaning of optional parameters.