package biotk

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package biotk
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MEME format for motifs. See the {https://meme-suite.org/meme/doc/meme-format.htmlspecification

}

type alphabet =
  1. | DNA
  2. | RNA
  3. | PROTEIN
type strand =
  1. | Forward
  2. | Reverse
  3. | Both
type probability_matrix = {
  1. alphabet_length : int option;
  2. motif_length : int option;
  3. nsites : int option;
  4. evalue : float option;
  5. data : float array array;
}
type t = {
  1. version : string;
  2. alphabet : alphabet option;
  3. strands : strand option;
  4. background_frequencies : (char * float) array option;
  5. name : string;
  6. alternate_name : string option;
  7. probability_matrix : probability_matrix;
  8. url : string option;
}
val to_channel : t -> out_channel -> unit