package biotk

  1. Overview
  2. Docs
Bioinformatics toolkit

Install

Dune Dependency

Authors

Maintainers

Sources

biotk-v0.0.0.tbz
sha256=4d487ddb8951d51f0c461a42da2e7f4a8fedcc3691718a93ac577da5d3058b2e
sha512=491ccccba2edb4565946361bbf3a0e764b57238cc8ee8af469a717dcdf18711cf9516becc91956997b870c8944ebe6d1662a2edbb5567c439991c5afd3bceb15

Description

biotk implements various functionalities in computational biology, like parsers/unparsers for some file formats, a few basic data structures and sequence algorithms, as well as access to some databases.

Published: 20 Jul 2021

README

Biotope toolkit library

biotk implements various functionalities in computational biology, like parsers/unparsers for some file formats, a few basic data structures and sequence algorithms, as well as access to some databases. The purpose of this library is to support the development of computational pipelines with the biotope library.

Installation

Latest release

opam install biotk

Latest commit

opam pin add -y biotk https://github.com/pveber/biotk.git

Dependencies (16)

  1. tyxml >= "4.4.0"
  2. vg
  3. rresult >= "0.6.0"
  4. result >= "1.5"
  5. ppx_deriving
  6. ppx_csv_conv
  7. otfm
  8. ocamlnet
  9. ocamlify
  10. ocaml >= "4.11.0"
  11. fmt
  12. core >= "v0.14.0" & < "v0.15"
  13. biocaml
  14. angstrom-unix >= "0.15.0"
  15. angstrom >= "0.15.0"
  16. dune >= "2.7"

Dev Dependencies (1)

  1. odoc with-doc

Used by (1)

  1. bistro-bio

Conflicts

None